FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183816

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183816
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13562123
Sequences flagged as poor quality0
Sequence length150
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA63850.038.780665
CAGTGGT85850.028.8426934
GTATCAA89250.027.9052249
GTGGTAT102850.024.2852636
GGTATCA115100.021.7006038
AGCAGTG130300.019.63492
TGGTATC127950.019.4649567
AAGCAGT134800.019.2255671
GCAGTGG166750.015.4969513
TATCAAC83800.06.528106710-14
TCTTGGG83850.05.960054435-39
CACACGT131000.05.034026140-144
Produced by FastQC (version 0.11.5)