FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183832

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183832
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18074517
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT111050.023.0122344
AGTGGTA123000.020.8349045
AGCAGTG122500.020.7480142
GCAGTGG132150.019.8284723
GTGGTAT188800.014.1455086
AAGCAGT228100.011.5097371
GTATCAA233650.011.3986579
GGTATCA274900.09.9238988
TGGTATC286500.09.7991377
Produced by FastQC (version 0.11.5)