FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183846

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183846
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15792188
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT96950.020.5661414
AGTGGTA108600.018.4924835
AGCAGTG126350.016.3117852
GTGGTAT150000.013.5805096
GCAGTGG152500.013.452283
TGGTATC170900.012.4672467
AAGCAGT169850.012.2959671
GTATCAA177650.011.9935779
GGTATCA182600.011.3530518
AGAGCAC140500.06.55774458
GAGCACA139800.06.5391139
GATCGGA165150.06.12466761
Produced by FastQC (version 0.11.5)