FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183857

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183857
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18098622
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA123050.016.2638287
TGGCTCA127000.015.5317236
CTCAAAC132100.015.4231139
ATGGCTC140650.013.9217425
GCTCAAA168950.012.1443728
CCTCTAG16450.010.6776350-54
TCTGATG175550.010.4136941
CTCTAGG13050.010.14981750-54
GATGGCT219800.09.2031864
CTCGGGT52250.07.687577720-24
TCTAGGA17750.07.543372650-54
CTGATGG260100.07.44573452
TGATGGC291350.07.06718733
CTAGGAT19800.06.8350850-54
GGTCCTC72400.05.82642445-49
CCTCGGG85150.05.173784720-24
Produced by FastQC (version 0.11.5)