FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183858

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183858
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17890318
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT87900.028.2537694
AGTGGTA91300.026.8862235
AGCAGTG131600.019.4834062
GTGGTAT131650.019.083186
TGGTATC151050.016.6321537
GCAGTGG154900.016.2653273
GTATCAA162750.015.5248519
GGTATCA166050.015.4330758
AAGCAGT174800.015.0751891
GCAGAGT113050.05.0939515-19
Produced by FastQC (version 0.11.5)