FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183860

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183860
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14580672
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT69850.026.6919064
AGTGGTA71600.025.7379045
AGCAGTG99450.019.4798642
GTGGTAT104700.018.219886
GTATCAA110700.017.2320569
GCAGTGG111650.016.8278273
TGGTATC123200.015.7174967
GGTATCA127050.014.8444968
AAGCAGT133150.014.5977811
Produced by FastQC (version 0.11.5)