FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183870

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183870
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16154443
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT86600.018.5354654
AGTGGTA91450.017.5524465
AGCAGTG114550.014.1553882
GCAGTGG126250.012.7142283
GTGGTAT132700.012.2589716
GTATCAA157200.010.6689059
TGGTATC176900.09.6842427
GGTATCA177200.09.4647418
AAGCAGT188050.09.057231
GATCGGA176150.06.32210451
GAGCACA198800.05.35872949
AGAGCAC210650.05.193968
TCGGAAG216800.05.17942863
Produced by FastQC (version 0.11.5)