FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183888

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183888
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17282622
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT106400.021.7165744
AGTGGTA126250.018.7012375
AGCAGTG125850.018.5983412
GCAGTGG146850.015.8817733
GTGGTAT170450.013.8095226
AAGCAGT180400.013.2328541
TGGTATC191400.012.3356237
GGTATCA215250.011.1025858
GTATCAA221300.011.0267489
Produced by FastQC (version 0.11.5)