FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183889

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183889
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17282622
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA116550.015.7528937
TGGCTCA123700.014.7841526
CTCAAAC128250.014.4267749
ATGGCTC139300.013.2833665
GCTCAAA156400.011.9225818
TCTGATG167150.011.2648741
GATGGCT204900.09.3820014
CCTCTAG13800.08.76376550-54
CTGATGG245050.07.96393062
TGATGGC279850.07.12652973
CTCGGGT52650.06.69966720-24
CTCTAGG13000.06.645053450-54
Produced by FastQC (version 0.11.5)