FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183897

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183897
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17242273
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCTCA128200.09.6579226
ATGGCTC128200.09.3205325
GGCTCAA124750.09.1172467
CTCAAAC146050.08.0340249
CCTCTAG13800.07.407097350-54
TCTGATG161150.07.2360541
GATGGCT166250.06.84110364
GCTCAAA209600.06.2850238
TCTAGGA13150.05.693067650-54
CTCTAGG12350.05.59555450-54
Produced by FastQC (version 0.11.5)