FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183904

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183904
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14117380
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA84050.025.522595
CAGTGGT87700.024.7886894
AGCAGTG112700.019.489912
GTGGTAT126750.017.6627646
GCAGTGG132350.016.6434633
GGTATCA148650.015.157388
GTATCAA150600.015.0089179
TGGTATC151100.015.0069997
AAGCAGT166450.013.4234121
Produced by FastQC (version 0.11.5)