FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183905

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183905
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14117380
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA104650.016.581297
CTCAAAC120950.015.2977579
ATGGCTC132700.013.5643925
TGGCTCA139100.012.6299956
GCTCAAA148500.012.3148558
GGTATAC72200.012.1662574
GTATACA74100.011.5627195
TCTGATG172750.010.64843751
AGGTATA93100.09.6669633
GATGGCT194850.09.127064
TACAAAC105850.08.4343748
CCTCTAG13750.08.37666250-54
ACAAACG106650.08.0331639
TATACAA112800.07.5320536
CTGATGG251800.07.37953662
CTCTAGG12000.07.318671750-54
CTCGGGT50200.06.940662420-24
TGATGGC300400.06.591173
AAGGTAT147600.06.58737752
TCTAGGA15300.06.02243750-54
Produced by FastQC (version 0.11.5)