FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183913

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183913
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19918421
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTACTCA35800.012.2640458
ACTACTC54900.07.99729827
CAAACTA58000.07.33376074
CCCTTAA56400.06.9026744
TCCCTTA73350.06.2904623
AAACTAC83950.06.09023335
AACTACT87450.06.00832226
TACTCAA76850.05.9004299
GGCCTAA20600.05.591902375-79
TACAAAC110550.05.02167842
Produced by FastQC (version 0.11.5)