FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183915

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183915
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13864769
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCTCA98650.014.5973466
GGCTCAA100450.014.2640937
ATGGCTC104800.013.4654765
CTCAAAC106900.013.0657799
TCTGATG124100.011.0976181
GATGGCT153100.09.5935724
GCTCAAA155000.09.336628
CCTCTAG9450.08.6842550-54
CTCGGGT43050.06.521421420-24
TCTAGGA11500.06.3850150-54
CTCTAGG9600.06.298937350-54
CTGATGG234300.06.2704122
TGATGGC248500.06.2581793
CTAGGAT11350.05.83513950-54
Produced by FastQC (version 0.11.5)