FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183927

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183927
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19450283
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA127250.014.4848447
TGGCTCA134550.013.324396
CTCAAAC144650.012.3933949
ATGGCTC154100.011.9140745
TCTGATG182800.09.7814861
GCTCAAA191000.09.6498728
GATGGCT225600.08.3295574
CTCTAGG13650.07.80534250-54
CCTCTAG19950.07.649902350-54
CTGATGG284000.06.7957692
TGATGGC317400.06.3060483
CTAGGAT19400.06.234052750-54
CTCGGGT59650.06.22725420-24
TCTAGGA23450.05.95554950-54
Produced by FastQC (version 0.11.5)