EGAF00005183929 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00005183929
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15346174
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCTACA	6670	0.0	6.526279	1
GTCTTCG	19105	0.0	6.063063	1
GTCCCTA	2235	1.0707068E-5	5.9420247	1
GTCTTTA	10965	0.0	5.786678	1
GTCTACG	8710	0.0	5.7601027	1
GTCTATT	8035	0.0	5.6930537	1
GTCTTCA	14390	0.0	5.6398993	1
GTACCTC	5365	0.0	5.6383705	1
GTCTCTG	6115	0.0	5.429446	1
GTCCACA	10135	0.0	5.387006	1
GTACTTA	4880	2.5465852E-11	5.2916083	1
GTCCTCG	15810	0.0	5.273343	1
GTCTCCG	14775	0.0	5.1933227	1
GTCTCCA	9245	0.0	5.1873546	1
GTGCCTA	4015	2.1233063E-8	5.1453147	1
GTCTGCG	20720	0.0	5.1275773	1
GTCCCCG	13465	0.0	5.095843	1
GTCTATA	6965	0.0	5.0846324	1
GTCTATC	10070	0.0	5.0554414	1