FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183932

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183932
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16385663
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT77000.019.6311684
AGTGGTA81950.018.357565
GTGGTAT118350.013.2588496
AGCAGTG126650.012.3480562
TGGTATC125400.012.1116297
GTATCAA132050.011.7742429
GGTATCA135300.011.5446188
GCAGTGG145000.010.7723233
AAGCAGT163050.09.6427311
CACACTA22852.2728756E-55.67027247
Produced by FastQC (version 0.11.5)