FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183933

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183933
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16385663
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGGCTC108350.013.0876115
TGGCTCA110500.012.1168846
GGCTCAA114150.012.0447137
TCTGATG127450.011.2779281
CTCAAAC128500.011.2598679
CCTCTAG10700.09.82212450-54
GATGGCT153200.09.5382124
CTCTAGG9000.08.79805250-54
GCTCAAA189400.07.753378
TCTAGGA13950.06.501785850-54
CTGATGG273400.06.11434752
CTAGGAT14100.05.92209350-54
TGATGGC305500.05.63143
CACACTA21302.9154198E-45.40728667
CTCGGGT58500.05.09436820-24
Produced by FastQC (version 0.11.5)