FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183941

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183941
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13566210
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCTCA96250.010.0965786
ATGGCTC91000.010.0458335
GGCTCAA94850.09.5626717
CTCAAAC102700.08.691559
TCTGATG117400.08.2422871
GATGGCT123350.07.41138464
CCTCTAG9700.06.82752650-54
CTCTAGG8050.06.25964150-54
GCTCAAA156100.05.99496178
CTGATGG198250.05.4874642
Produced by FastQC (version 0.11.5)