FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183944

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183944
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13825156
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGCCG5451.4060504E-411.887766
ACTATAG32250.010.2665758
CTATAGT31950.09.9124129
GATCTAG7500.00261794738.6495773
CACTATA41400.07.99855477
AACACTA44450.07.9355745
ACACTAT46150.07.79924066
ATCTAGC11653.076183E-47.41496944
AAACACT72350.05.6714014
Produced by FastQC (version 0.11.5)