FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183950

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183950
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15973609
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA78950.023.6153765
CAGTGGT88200.021.3835544
GTATCAA115200.016.8091479
GTGGTAT120800.016.0299646
AGCAGTG127450.015.1997972
GGTATCA134450.014.7772688
TGGTATC141600.013.77699857
GCAGTGG141850.013.600433
AAGCAGT167500.011.7765011
TAAGTGC42400.07.6400095
ATAAGTG55650.06.0796694
AATCTAG19150.05.26282245-49
ATCCAAC76450.05.1788393
Produced by FastQC (version 0.11.5)