FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183956

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183956
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14354221
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGTCC42800.06.9644741
GGGGTCT59850.06.31665951
GGGGGCC61200.05.8209371
CCCCTAA17909.329642E-45.68621441
GGGGTCA73450.05.6419771
GGGGTGT69650.05.42788271
GGGGGTC48305.456968E-125.4188061
GGGGTGC101850.05.282251
GGGGCCT54205.456968E-125.09721041
GGGGCCC37101.4415491E-75.0950411
GGGGGTT34801.0789736E-65.01395271
Produced by FastQC (version 0.11.5)