FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183959

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183959
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16046385
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAC108950.014.3393019
TGGCTCA112450.013.1899726
GGCTCAA114900.013.1594197
ATGGCTC122700.011.7361135
TCTGATG137150.010.628341
GCTCAAA153600.010.1715798
GATGGCT166600.09.0326294
CTGATGG240750.06.5810942
CCTCTAG14800.06.32327750-54
TGATGGC280200.05.98725753
CTCTAGG11600.05.833516650-54
Produced by FastQC (version 0.11.5)