FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183967

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183967
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16318320
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCTCA108750.011.6499176
ATGGCTC110050.011.6428345
GGCTCAA117650.011.5641037
CTCAAAC137300.09.8566829
CCTCTAG11600.08.68762350-54
GATGGCT152250.08.6049464
TCTGATG156100.08.0772081
CTCTAGG9950.07.66855750-54
GCTCAAA205250.06.80396378
CTAGGAT12900.06.69610750-54
TCTAGGA12550.06.53870950-54
CTCGGGT44400.06.03128420-24
TGATGGC263900.05.29171473
CCTAGTC7002.746874E-75.14250280-84
CTAGACG8852.8212526E-95.0432496120-124
CTGATGG254300.05.04308752
Produced by FastQC (version 0.11.5)