FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183981

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183981
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14756773
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA90450.013.4530967
TGGCTCA98500.012.4267296
CTCAAAC106500.011.9654249
ATGGCTC107850.011.8166085
TCTGATG144800.08.7012931
GCTCAAA148350.08.6874148
GATGGCT156850.08.675984
CCTCTAG13050.06.288583850-54
CTCGGGT42150.06.18250920-24
TGATGGC241000.05.7660913
CTGATGG225250.05.7547172
CTCTAGG9900.05.671760650-54
Produced by FastQC (version 0.11.5)