FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183986

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183986
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15124204
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA84250.021.27375
CAGTGGT82600.021.2629454
AGCAGTG116900.015.6599992
GTGGTAT124750.014.5980096
GCAGTGG138200.013.2814583
GTATCAA140300.012.6722269
GGTATCA146750.012.3114518
TGGTATC149050.012.0248867
AAGCAGT157650.011.914591
GAGCACA128300.05.3858999
Produced by FastQC (version 0.11.5)