FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183987

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183987
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15124204
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGGCTC101950.014.1208285
TGGCTCA101100.014.0268836
GGCTCAA104350.013.9345687
CTCAAAC118650.012.4978159
TCTGATG142550.010.9582551
GATGGCT145900.010.4594644
GCTCAAA174300.08.9618358
CCTCTAG13050.07.943110550-54
CTCTAGG11450.06.789798750-54
CTGATGG233250.06.73464632
CTCGGGT44750.06.627578320-24
TGATGGC255600.06.56181433
CTAGGAT15050.05.64396350-54
TCTAGGA16000.05.488813450-54
Produced by FastQC (version 0.11.5)