FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183990

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183990
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16806071
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA74600.016.6927055
CAGTGGT79650.016.4476954
GTGGTAT114000.011.9968766
AGCAGTG116250.011.8399122
GTATCAA127200.010.4689729
TGGTATC140500.09.5804237
GCAGTGG142000.09.4792213
GGTATCA141150.09.1793328
AAGCAGT151550.09.1717141
Produced by FastQC (version 0.11.5)