FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184014

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184014
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15327264
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAGAC21550.011.3574936
TTAGACC19700.010.9624067
TAGTTAG24050.010.4797564
GTCTCAG55400.08.5549341
TAGACCC30150.07.64035468
AGTTAGA34050.07.1880765
AACACTA65100.06.6348719
CAACACT75950.05.9712288
ACACTAG16050.05.472407370-74
Produced by FastQC (version 0.11.5)