FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184015

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184015
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15327264
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAGAC21800.012.5509916
TTAGACC22350.012.2422497
TAGTTAG24450.011.1894164
TAGACCC31200.09.4621868
AGTTAGA34450.07.94228125
GTCTCAG55800.07.37099651
AACACTA66650.06.1579819
CAACACT76700.05.72659838
ACACTAG16400.05.530501470-74
GTAGTTA57351.8189894E-125.0215993
Produced by FastQC (version 0.11.5)