FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184040

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184040
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13819879
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAATTGC73100.010.9310045
AATTGCC105000.07.3358236
ACCCCCC19300.07.23638740-44
ATAATTG119300.06.9409464
GTAATAA122300.06.9159071
TGCCTCC123550.06.8171169
TTGCCTC125000.06.56521948
CTAATCG27400.05.93857380-84
ATTGCCT144600.05.5259777
ATCCAAC103100.05.239633
CTCGAGT31250.05.06795520-24
Produced by FastQC (version 0.11.5)