FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184046

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184046
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13255195
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTTAG29900.08.1853145
CCCCTTA31850.07.24051954
CTTAGAG47800.06.023657
TAGAGCC43751.8189894E-125.75858749
CCTTAGA55500.05.3176356
TTAGAGC57050.05.29931358
Produced by FastQC (version 0.11.5)