FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184057

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184057
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14194392
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTTAG37550.09.3949335
GTGCACA52950.09.1750811
CCCCTTA41300.08.7162054
CACACAA63700.08.3637274
TAGAGCC51100.08.0309639
TTAGAGC54750.07.8900688
GCACACA62300.07.7427333
TGCACAC66850.07.32684562
CTTAGAG60150.06.82264667
CCTTAGA64650.06.1249816
GCCCCTT71250.05.6586223
GATCGGA185300.05.578896140-144
TAGATCG61350.05.562026140-144
CACAAAC106400.05.4809266
AGATCGG211150.05.1209216140-144
TGCCCCT70650.05.09761862
Produced by FastQC (version 0.11.5)