FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184075

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184075
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15243342
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCTTA40950.015.4702194
AACACTA59700.015.4349847
ACACTAT68350.014.1135688
CACTATA68400.013.5770099
CAAACAC97900.09.9270165
TACCCCT73650.09.1926812
AAACACT107250.08.9944916
GTACCCC73250.08.74700451
ACCCCTT83650.08.08954053
TATTTAG93450.07.4724499
CCCTTAT109900.06.48492865
ATCAAAC166750.06.38936663
TCAAACA152800.06.3131944
Produced by FastQC (version 0.11.5)