FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184090

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184090
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15831499
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTATA49450.012.2282069
ACACTAT52400.012.0892998
AACACTA52700.011.8838837
AAACACT85400.08.1764286
CAAACAC120300.05.9838975
ATCAAAC145950.05.23579843
GCCCTTA60550.05.1187194
Produced by FastQC (version 0.11.5)