FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184091

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184091
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15831499
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACTAT50000.011.6625748
CACTATA51100.011.5524049
AACACTA52700.010.6552437
AAACACT87350.07.00588276
GCCCTTA64800.05.78198434
CAAACAC122750.05.3957945
TAGCCCT72700.05.25325542
ATCAAAC146250.05.22224473
TATTTAG77950.05.0795599
Produced by FastQC (version 0.11.5)