FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184209

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184209
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14707754
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACACTA30850.07.2495998
CTACACT39550.06.38453157
ACACTAT44602.0008883E-115.4901879
AACACTA36451.1557131E-75.146167
Produced by FastQC (version 0.11.5)