FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184214

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184214
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18203107
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACGTAC47150.09.6205562
CGACTTA38150.08.3029316
CTTACAC51750.06.39921579
ATACGTA82500.05.91520451
ACACATA76900.05.8977667
ACACTAT66450.05.41691358
ACGTACA83150.05.36870533
GTACACA74750.05.29693655
CCTAGAC17950.05.133892115-119
AACACTA64750.05.11436137
Produced by FastQC (version 0.11.5)