FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184339

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184339
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18018995
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT33000.014.56681
GTGAGTA42950.011.2330822
TAAGGGG46050.011.0995749
CTAGGAG13900.07.872350750-54
GTATAAG89550.06.51210076
ATAAGGG88450.06.42976058
GAGTATA87250.06.10737754
TCTAGGA20200.05.98733550-54
TAGCATG29704.9378286E-85.81728468
TTCTAGG19400.05.78893350-54
TGAGTAT87800.05.7410593
TATAAGG114300.05.10157547
Produced by FastQC (version 0.11.5)