FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184389

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184389
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15313992
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTATGT103150.012.5626333
TATGTTG102250.012.5316585
TGTTGAC102750.012.4004147
GTATGTT108150.011.8487034
TGGTATG121250.010.98524952
TTGACGC125550.010.6637119
CTGGTAT127400.010.4330311
GTTGACG141150.08.9751668
CGCTAGG15200.08.05221575-79
ATGTTGA171550.07.5531726
GCTAGGC18250.06.86430275-79
CCGCTAG18900.06.55204175-79
CTTGCGA91800.06.27324257
CTAGGCT21200.06.11289175-79
TGCGAAT103950.06.0243059
TTGCGAA126100.05.0802578
Produced by FastQC (version 0.11.5)