FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184432

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184432
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15972370
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAGACC23450.011.359147
TAGACCC25850.09.4690188
GTTAGAC32800.07.9016036
TAGTTAG36700.07.6504654
AGACCCC44750.06.4351749
AGTTAGA58750.05.14675475
GGGGGGG58800.05.1440852
Produced by FastQC (version 0.11.5)