FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184519

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184519
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14627549
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACCCC43850.013.9550599
AGTAAGT86900.07.80813171
GTAAGTA89650.07.7125472
ATAACCC86400.07.1658398
GTATAAC117300.05.9532566
GCCCTTA54500.05.8120534
TATAACC128950.05.5829157
Produced by FastQC (version 0.11.5)