FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184552

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184552
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14808275
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT52800.015.0099381
GTGAGTA52750.014.753882
TAGGAGG52100.012.8488587
GAGTAGG57450.011.9161814
TGAGTAG54550.011.7570593
GGAGGGG78450.08.7165389
GTCTCTT78600.08.402511
AGGAGGG84600.08.1680288
CCACTCA57500.07.5109849
GCCACTC69600.06.82576048
CTAGGAG23250.06.68782250-54
AGTAGGA107950.06.3346155
GTAGGAG113500.06.15176
AGCCACT78000.05.5370187
TTCTAGG35100.05.00422250-54
Produced by FastQC (version 0.11.5)