FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184577

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184577
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14055658
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTCCCA73500.07.05212262
CAACCTA34950.07.00268659
CCAGGGA79250.06.7210816
AGTTATA83250.06.0606531
AACTCCC89000.05.91557651
AGGGATT98200.05.71763048
TCCCAGG101050.05.69874
CAGGGAT100050.05.53995947
CCCAGGG102050.05.1489255
GTTATAT95000.05.0014392
Produced by FastQC (version 0.11.5)