FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184619

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184619
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13993151
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGTAG133350.06.69489051
GGTGTTG172150.06.2315211
GGTGTAC104950.05.89971261
GGTGTAT92750.05.66661551
GGTATTA68150.05.49354031
GGTATAC74950.05.3793671
GGTAAAA150600.05.25875041
GGTGTAA69950.05.249251
GGTGTTC191550.05.14935971
GGTATCT99050.05.0881321
GGTGTTA47155.475158E-105.03903151
GGTGTGA73250.05.01276541
Produced by FastQC (version 0.11.5)