FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184621

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184621
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14801775
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGTGT73750.014.5650541
GGTGTTT126100.012.2596171
GGTGTTG151500.011.4977011
GTGTGTC61550.011.2321942
GGTGTTC148050.011.2263731
GGTATAA134100.011.0411381
GGTGTAG117850.010.7159831
GGTGTAC90050.010.6390451
GGTGTTA64600.010.5610661
GGTGTAA88150.010.4566791
GGTATAT166350.09.9477411
GGTGTGA84750.09.6772331
GGTAAAA204950.09.5969621
GGTATTT204700.09.5023141
GGTATAC66900.09.4385561
GGTATTC210250.09.3550411
GGTGTCC94250.09.1638511
GGTATCT142550.09.1137721
GGTATTG231200.09.0724051
GGTGTCG114150.09.0286921
Produced by FastQC (version 0.11.5)