FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184677

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184677
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14307434
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT45150.013.9956191
TAACCCC48000.012.89720259
GTGAGTA48750.012.8534972
ATAACCC78400.08.5389648
TGAGTAT105650.06.3367333
GTATAAC125600.05.96059476
AGCATGA155050.05.8961739
GAGTATA115050.05.81891734
TATAACC141700.05.53726057
CAGCATG180700.05.05922378
Produced by FastQC (version 0.11.5)