FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184703

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184703
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15666895
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA47450.09.70949
CCCTTAA50400.08.1414934
ACACGCA85500.07.83451752
GCCACTC59700.07.1142048
GACACGC96600.06.8437031
CTCGCCT72200.06.28159573
AGCCACT80300.05.55807977
ACGCAGG143450.05.31942944
GTTCCCT85400.05.27424961
CTAGCTC17750.05.192124445-49
CAGGATC141900.05.02228557
Produced by FastQC (version 0.11.5)