FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184744

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184744
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14215054
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA120200.09.4813071
GAGCACA125450.08.8379949
TCGGAAG138150.08.1851493
AGAGCAC135800.08.0583758
ATCGGAA161250.07.6379042
AAGAGCA209500.05.84209447
CGGAAGA253800.05.0211734
Produced by FastQC (version 0.11.5)