FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184800

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184800
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12989578
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAGCT27900.024.30614920-24
CTAGCTA29600.022.91018720-24
CTAACTA36700.018.55649225-29
CCTAAGG35950.018.42376740-44
GGTCCTA37100.017.89099535-39
GTCCTAA37900.017.62731735-39
AGCTAAC38850.017.52950120-24
GCTAACT38900.017.35897325-29
CTAAGGT39550.016.89238540-44
TCCTAAG44100.015.5082435-39
TAGCTAA44500.015.4009120-24
CCCTAGC12100.015.34983820-24
TCCTAGC13050.014.67373120-24
ACCTAGC12350.013.75670620-24
CCCTAAG13100.013.1889146
GCCTAGC11700.013.0442620-24
CCAGTGA53250.013.00628750-54
CTAAGAG13900.012.947758
GGCCCTA16450.011.3813023
TAGCGAA64950.010.95145945-49
Produced by FastQC (version 0.11.5)